BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011E03SP1|AL426220
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1377 1543 0.0
>3x_Contig1377
Length = 8397
Score = 1543 bits (776), Expect = 0.0
Identities = 801/808 (99%), Gaps = 3/808 (0%)
Strand = Plus / Plus
Query: 1 agcggatgtttggttggacaaggctggtaaagaggtagacacccatacctggacctctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3088 agcggatgtttggttggacaaggctggtaaagaggtagacacccatacctggacctctga 3147
Query: 61 ttcttcctccgtttattcattatcaccatcggatcaatacagggctatgtttgattccga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3148 ttcttcctccgtttattcattatcaccatcggatcaatacagggctatgtttgattccga 3207
Query: 121 tcttttgttaaacaatcaagatactttggattcatctactgcctttaccattggcaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3208 tcttttgttaaacaatcaagatactttggattcatctactgcctttaccattggcaataa 3267
Query: 181 cgtttctgaggaaaactctcccttaatgaacgcyactaatcctgacaacggatttgattt 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3268 cgtttctgaggaaaactctcccttaatgaacgctactaatcctgacaacggatttgattt 3327
Query: 241 cgaaaagaatcaatttacacagctgcctttagctgctgagagtacagacctaccaaccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3328 cgaaaagaatcaatttacacagctgcctttagctgctgagagtacagacctaccaaccct 3387
Query: 301 ggattcagttgaaatagataatg-atttgcaagtg-aagatcgaagatggagaagaggtt 358
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 3388 ggattcagttgaaatagataatgcatttgcaagtgcaagatcgaagatggagaagaggtt 3447
Query: 359 aagamaccaaagaagcgtgcmactcagaaacctcaaaataagaagagaggctccagaaag 418
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3448 aagaaaccaaagaagcgtgcaactcagaaacctcaaaataagaagagaggctccagaaag 3507
Query: 419 agattgacggcagatcaaagagtaactcacaacatgatcgagaagagatacagaataaat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3508 agattgacggcagatcaaagagtaactcacaacatgatcgagaagagatacagaataaat 3567
Query: 479 attaataccaagatcggaaaattacaaaagattatcccatgggtggcttgcgaagatact 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3568 attaataccaagatcggaaaattacaaaagattatcccatgggtggcttgcgaagatact 3627
Query: 539 gcgttcgttgtcgataataaag-tcttgagtkctggagaagattctttgcctctaaagaa 597
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 3628 gcgttcgttgtcgataataaagctcttgagtgctggagaagattctttgcctctaaagaa 3687
Query: 598 agtaaaactgaacaagagtatgattctcgaaaaggctgtcgattacattctatacctaca 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3688 agtaaaactgaacaagagtatgattctcgaaaaggctgtcgattacattctatacctaca 3747
Query: 658 aaacaacgaaagactattcgagctagaggtccaaagattaagaaaagaaatcaatgaact 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3748 aaacaacgaaagactattcgagctagaggtccaaagattaagaaaagaaatcaatgaact 3807
Query: 718 taaagccaatacctcaaaccaatgattgatttttttacacaggatggatgaaaacactgt 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3808 taaagccaatacctcaaaccaatgattgatttttttacacaggatggatgaaaacactgt 3867
Query: 778 tgcagatatttctttacgtaacagggtc 805
||||||||||||||||||||||||||||
Sbjct: 3868 tgcagatatttctttacgtaacagggtc 3895
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6828
Number of Sequences: 1807
Number of extensions: 6828
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)